PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04598.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 350aa MW: 38333.3 Da PI: 7.3953

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.3	4.7e-20	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv++v ++G g+W +I++ g++R++k+c++rw +yl RWW04598.1 15 KGPWTPEEDSKLVEYVDKHGRGSWQRIPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	56.4	6.6e-18	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia +++ gRt++++k++w+++l RWW04598.1 68 RGKFTEEEEQLVIHLHSVLGNK-WSSIATKLP-GRTDNEIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MVKSSNRDEA GGVKKGPWTP EEDSKLVEYV DKHGRGSWQR IPKLAGLNRC GKSCRLRWTN 60 YLRPDIRRGK FTEEEEQLVI HLHSVLGNKW SSIATKLPGR TDNEIKNYWN THLRKKLIRM 120 GIDPVTHRPA TNLNLLTGLS SLLSAGGLGG TPSHLDNALK LQADVAHLLK LQLVQSLIQV 180 LTSSYGTPNM DLMNLFRSPL LGNYQPSDLL QLSRQIAGGL GGSLSLQSSI PMTPNLSILS 240 HYLNNIGLQP TTPEHSFPSD AAAVTASDAS RTEEPSAEIS NVSSTNSIPA SSSTHPLVSA 300 SSETKNIDLV QSSDILCANT LASEPFEACW DNLMKLDTHD SHFGWKDIIE

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MVKSSNRDEA GGVKKGPWTP EEDSKLVEYV DKHGRGSWQR IPKLAGLNRC GKSCRLRWTN  60
YLRPDIRRGK FTEEEEQLVI HLHSVLGNKW SSIATKLPGR TDNEIKNYWN THLRKKLIRM  120
GIDPVTHRPA TNLNLLTGLS SLLSAGGLGG TPSHLDNALK LQADVAHLLK LQLVQSLIQV  180
LTSSYGTPNM DLMNLFRSPL LGNYQPSDLL QLSRQIAGGL GGSLSLQSSI PMTPNLSILS  240
HYLNNIGLQP TTPEHSFPSD AAAVTASDAS RTEEPSAEIS NVSSTNSIPA SSSTHPLVSA  300
SSETKNIDLV QSSDILCANT LASEPFEACW DNLMKLDTHD SHFGWKDIIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	3e-73	MYB family protein