PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 222aa MW: 25240.8 Da PI: 10.0521 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.5 | 5.5e-19 | 63 | 116 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq++ Le F+ +r++ a ++++LA+klgL+ +qV vWFqNrRa++k RWW04129.1 63 KKRRLSEEQVKLLEMSFRDERKLEAGRKAHLAAKLGLDANQVAVWFQNRRARHK 116 45689***********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 109.3 | 2.7e-35 | 63 | 154 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrls+eqvklLE+sF+ e+kLe rK++la +Lgl++ qvavWFqnrRAR+k+kq+ + y Lk a+da++ +++rLe+ev++L+e+l+e RWW04129.1 63 KKRRLSEEQVKLLEMSFRDERKLEAGRKAHLAAKLGLDANQVAVWFQNRRARHKSKQVKEAYVELKLAHDAVVVDKCRLENEVSKLKEKLSE 154 9***************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MTEEKKVQIP SLWASERCSQ TPQGRSASRS FTFAFLFRVH VHVRVPGEKR TRRRRKKAKG 60 DAKKRRLSEE QVKLLEMSFR DERKLEAGRK AHLAAKLGLD ANQVAVWFQN RRARHKSKQV 120 KEAYVELKLA HDAVVVDKCR LENEVSKLKE KLSEAEEEVR KLASGMNGAS GGNAESGGGG 180 SPSSCFSAAS LQWQQEEAEL MCINEYDFTN YMMMEWADLY GV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 49 | 57 | KRTRRRRKK |
2 | 52 | 66 | RRRRKKAKGDAKKRR |
3 | 52 | 67 | RRRRKKAKGDAKKRRL |
4 | 53 | 67 | RRRRKKAKGDAKKRR |
5 | 53 | 68 | RRRRKKAKGDAKKRRL |
6 | 54 | 69 | RRRRKKAKGDAKKRRL |
7 | 111 | 119 | RRARHKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-27 | HD-ZIP family protein |