PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 24165.5 Da PI: 9.3777 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112 | 6.5e-35 | 3 | 152 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k....................kvkaeekewyfFskrdkkyatgkrknrat 78 lppGfrFhPtdeel+++yL++kv+g+++ + +vi e++++k+eP dLp + + + +ewyfF+ +d+ky+tg+r+nrat RWW04031.1 3 LPPGFRFHPTDEELITHYLAPKVSGTSFCA-TVIGELGLNKIEPCDLPcEslhlsfcsascviiitqpcaASTRVGEEWYFFCMKDRKYPTGSRTNRAT 100 79*************************988.89***************5489*******999999888652223456********************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrle 129 +sg Wkatgkdke+++ +++l+g + + + ++ + t +mheyrle RWW04031.1 101 DSGHWKATGKDKEIHR-RRNLIGDEEDSGLLqrQVATKVRRLTGSCMHEYRLE 152 ***************9.77788877665555213344444579999****985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MFLPPGFRFH PTDEELITHY LAPKVSGTSF CATVIGELGL NKIEPCDLPC ESLHLSFCSA 60 SCVIIITQPC AASTRVGEEW YFFCMKDRKY PTGSRTNRAT DSGHWKATGK DKEIHRRRNL 120 IGDEEDSGLL QRQVATKVRR LTGSCMHEYR LEGNSVEHRA SQKQSKPSQK NNSIMLPLSL 180 SSNANRQPSN LKPRRFASPR RQFGAVAGEL WPWQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39610.1 | 9e-49 | NAC family protein |