PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 365aa MW: 40542.6 Da PI: 4.7521 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.2e-17 | 37 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l+ v++ G g+W+t +++ g++R++k+c++rw +yl RWW03935.1 37 RGPWTPEEDEVLASFVRREGEGRWRTLPKRAGLRRCGKSCRLRWMNYL 84 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 39.6 | 1.2e-12 | 95 | 154 | 6 | 48 |
HHHHHHHHHHHHHTTTT..................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg..................tWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW03935.1 95 PDEEDLILRLHRLLGNRlldtiapfdlfffgisslGWSLIAGRIP-GRTDNEIKNYWNTHL 154 89*******************************************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MRNPSQSSAP GSSSTAAVEG MRRGGPTPCC SKVGLKRGPW TPEEDEVLAS FVRREGEGRW 60 RTLPKRAGLR RCGKSCRLRW MNYLRPSIKH GPIAPDEEDL ILRLHRLLGN RLLDTIAPFD 120 LFFFGISSLG WSLIAGRIPG RTDNEIKNYW NTHLSKKLIS QGIDPRTHKP LASSTPDAIQ 180 QPLAPPSYAN PNPSRVLNID PSVLHEEGTH HRGIIVQDNE RSFSDRENLQ HDDDDDDEGW 240 QNNELLDGAI GNQEGGDYGT SEDGGIGIDC YTDDIFSSFL DSLINEDAFQ QQQNVSNNED 300 NLILDNTINN NNSSNGNNQE MQPARTSTAP SGPVCGFETF WEADFVAQIG LEEDVHEQFA 360 HHTGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-64 | MYB family protein |