PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 31663.8 Da PI: 4.8998 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4.2e-08 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT eEd++l++ +G +W+++++ g RWW03927.1 14 KGPWTSEEDKKLINFMLTHGQCCWRAVPKLAG 45 79***************************988 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.2e-15 | 72 | 115 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g +++E++l ++++ qlG++ W++Ia+ ++ gRt++++k+ w++y RWW03927.1 72 GMLSEDEEKLVIELHSQLGNR-WSKIASQLP-GRTDNEIKNIWNSY 115 55699****************.*********.***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MGRKPCCEKV GLKKGPWTSE EDKKLINFML THGQCCWRAV PKLAGLLHFC FYMRKRINVW 60 WTNYLRPDLR RGMLSEDEEK LVIELHSQLG NRWSKIASQL PGRTDNEIKN IWNSYIMKKL 120 RKMGIDPLTH KPISPSTEEQ QRRCMDMSCD GDEQAELDCS MDSSETAEEE AKEKNTASPR 180 DPAADASLSN CPEFCTDEVP MLQPHEILIP CDSSAFSSSC SSASSSSSSS PRMEPPEPMH 240 LWGWDDPTGW NPIDQELTWK SYQEDWKYDV FCFDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 2e-72 | MYB family protein |