PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW03894.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 356aa    MW: 39124.9 Da    PI: 6.5683
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW03894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH43.36.2e-14280305126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +ktelC+ + ++G+C+yGd C+FaHg
  RWW03894.1 280 FKTELCNKWEESGECPYGDHCQFAHG 305
                 79***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MQHELDSPSN GDCFGSSIAS EPVVTPDRQS ATPYLNKDGD LPYWYSIFSP KEGTPSLVTT  60
PLAASGSIFV PASLSSFFEP EVAATDYGNR LYLARLTLQY QEIAERYDLC LSDLRDCTEE  120
IESLRRENAT LRMANAELAR RLGLIAGKHA GRVPSSASSA LEEEFHLLNV AELTPPPQEE  180
CPTRVLSIQE SGGGHPFAGP PVAEKHVSLP KSISIRSSGY LKLNQDGKSS SAGKRNGRFG  240
VSNPAMKKGA RRGREDGEQE REGGDGGGAL ELEVYHQGMF KTELCNKWEE SGECPYGDHC  300
QFAHGITELR PVLRHPRYKT EPCRMILSGG ACPYGHRCHF RHSLSLADHQ RLLIRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.13e-56C3H family protein