PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33394.1 Da PI: 7.6679 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l++ v++ G g+W+t +++ g+ R++k+c++rw +yl RWW03875.1 34 RGPWTAEEDEVLARFVRREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 81 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 9.1e-17 | 87 | 132 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW03875.1 87 RGPITPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 132 8999******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MRSPSQPSDA MEVQRRPGGP TRTASPCSKV GIKRGPWTAE EDEVLARFVR REGEGRWRTL 60 PKRAGLLRCG KSCRLRWMNY LRPSVKRGPI TPDEEDLILR LHRLLGNRWS LIAGRIPGRT 120 DNEIKNYWNT HLSRKLIKQG IDPRTHKPFT PPTAPAPAAP STARHPTENP NTTPCVPQEP 180 GNGVLYGSDL HHHDGDGWQT SEAFASEGNR ALHFSREEGR RVADDVFSDL LDSFVNDDIF 240 MQHQHMNNND GNKDADNTTI TTTNNNNNSD MIDPTGTSSV PYFALEGLWE DAFTYFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 6e-74 | MYB family protein |