PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03863.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 518aa MW: 57621.4 Da PI: 4.7441

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	91.9	7.5e-29	16	141	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT........................ CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks........................ 74 Fl k+y++++d+++++++sws+++ sfvv++ +fa ++Lp+yFkh+nf+SF+RQLn+Y +++ ++ RWW03863.1 16 FLLKTYDMVDDASTDDIVSWSSTNASFVVWNAPDFAARLLPTYFKHNNFSSFIRQLNTYVRTQSPSSFPC--Fvrfvdpvrgslmsnpnlgvifell 110 9********************************************************65555555544..1569999999999999999988887 PP ....XTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 75 ....kekiweFkhksFkkgkkellekikrkk 101 +++ weF+++ F kg+k+ll +i+r+k RWW03863.1 111 vskiDSERWEFANEDFVKGQKRLLGNIHRRK 141 765449*********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
AGREMDGGGG GGPAPFLLKT YDMVDDASTD DIVSWSSTNA SFVVWNAPDF AARLLPTYFK 60 HNNFSSFIRQ LNTYVRTQSP SSFPCFVRFV DPVRGSLMSN PNLGVIFELL VSKIDSERWE 120 FANEDFVKGQ KRLLGNIHRR KPIHSHSHPP GGGLADSERA ALEEEIDQLN KEKTGLKDCL 180 LKFKQQQSGT KIQIEDLNRR LADMEQRQLK MVAFVQRAMQ NPQLMETLVK MAAASSVDFS 240 YIHKKRRLPL DVDYCQETSE NSFCDDHSST TKPENGRMLD LDFCDKLKLE LRSAIPDDNL 300 AMVRTQSSYE DNGSSQPKQT DCSQEPMECP PLVHETLQLC DTEAPACPTK NDLFIGEIDE 360 GDGLFPCHLS LTLASSMMQI DSSNCPGKNQ DLVDRSPVSI KDLRPANATD LKASNTERDD 420 DLTLPVGNDR STIGNSADAK AVSSWEAPPT RNEAPAIPAG GVNDVFWQQF LTERPGSSDT 480 EEASSCRRPN PCDEQGEERM EGSHNRGTSK KDMEQLKL

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

AGREMDGGGG GGPAPFLLKT YDMVDDASTD DIVSWSSTNA SFVVWNAPDF AARLLPTYFK  60
HNNFSSFIRQ LNTYVRTQSP SSFPCFVRFV DPVRGSLMSN PNLGVIFELL VSKIDSERWE  120
FANEDFVKGQ KRLLGNIHRR KPIHSHSHPP GGGLADSERA ALEEEIDQLN KEKTGLKDCL  180
LKFKQQQSGT KIQIEDLNRR LADMEQRQLK MVAFVQRAMQ NPQLMETLVK MAAASSVDFS  240
YIHKKRRLPL DVDYCQETSE NSFCDDHSST TKPENGRMLD LDFCDKLKLE LRSAIPDDNL  300
AMVRTQSSYE DNGSSQPKQT DCSQEPMECP PLVHETLQLC DTEAPACPTK NDLFIGEIDE  360
GDGLFPCHLS LTLASSMMQI DSSNCPGKNQ DLVDRSPVSI KDLRPANATD LKASNTERDD  420
DLTLPVGNDR STIGNSADAK AVSSWEAPPT RNEAPAIPAG GVNDVFWQQF LTERPGSSDT  480
EEASSCRRPN PCDEQGEERM EGSHNRGTSK KDMEQLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-106	HSF family protein