PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW03738.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 293aa    MW: 30284.3 Da    PI: 10.077
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW03738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.14.8e-061091211527
                 -TTTTT-SS-SSS CS
     zf-CCCH  15 CkyGdrCkFaHgp 27 
                 Ck+G++C+FaHg+
  RWW03738.1 109 CKFGEKCHFAHGE 121
                 ***********96 PP
2zf-CCCH35.61.6e-11260284126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 ykt+lC +f + G C +GdrC+FaHg
  RWW03738.1 260 YKTKLCENFTK-GSCTFGDRCHFAHG 284
                 9**********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MAAMIVVEAT IGDFGGRGSF RGVYRWRTKL WSSLSTMEGV AHVSGGRRNE AQRLGCRTCS  60
LATEEASVPC VVSRGSNRGG IGGGGKSCTR IDGSGSRGRR AVGLVAEGCK FGEKCHFAHG  120
ERELGKPILS SLDGPTAPSM GGRLGGRFEL PPPAGVHAAA ASFGVSATAK ISVDASLAGA  180
IIGKGGVNTK QICRMTGAKL SIRDHESDPN LRNIELEGSF DQIKQASAMV RELIVNISAS  240
TGIAARNPAT AASAGPGSNY KTKLCENFTK GSCTFGDRCH FAHGASELRK SAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17886RGGIGGGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.18e-55C3H family protein