PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03280.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WRKY

Protein Properties

Length: 448aa MW: 48873.9 Da PI: 9.5997

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	66.1	5.7e-21	285	335	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++p s +C vkk+vers+edp+vv++tYeg+H+h+ RWW03280.1 285 EDGYRWRKYGQKAVKNSPYP-------SVSCGVKKRVERSSEDPEVVVTTYEGQHTHP 335 8*****************.......579*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MTVRPTRTCN SPSKRLLYPQ TMKSNRGSSE NSSRLGYPAE VRSRAAQPRS HRPSGSPCPN 60 RLWFGSRLPY ESADRHVRQT GARVRSHHQV PYPPTRLTPP PPQPAIATRA PDDGDAMMVE 120 KREDEMEASA AAIPPRFSSQ IPSTFPLPGG FFDADGGDKG SIGFLELLGL RDLHQPPFLF 180 ELPPPTSAVE PPPATSDPPS RLPPPAESSD AANFPATPSS ISSSSTEAAV NAIKPAASSI 240 TNGDEGEQAN TNRTSKEEEK KKKGQKRQRE PRFAFKTRSE VDHLEDGYRW RKYGQKAVKN 300 SPYPSVSCGV KKRVERSSED PEVVVTTYEG QHTHPSPVLA RGAHLPLPPP PLVLSERPPP 360 PLGFGFPSSV RSKDGHIPLL GSYLPPSPLD FRPMTAPQPL MLTSDPTTAV AISGDPRHGC 420 NRTAEVSIRD HGLLQDLIPS KIRKEEEL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MTVRPTRTCN SPSKRLLYPQ TMKSNRGSSE NSSRLGYPAE VRSRAAQPRS HRPSGSPCPN  60
RLWFGSRLPY ESADRHVRQT GARVRSHHQV PYPPTRLTPP PPQPAIATRA PDDGDAMMVE  120
KREDEMEASA AAIPPRFSSQ IPSTFPLPGG FFDADGGDKG SIGFLELLGL RDLHQPPFLF  180
ELPPPTSAVE PPPATSDPPS RLPPPAESSD AANFPATPSS ISSSSTEAAV NAIKPAASSI  240
TNGDEGEQAN TNRTSKEEEK KKKGQKRQRE PRFAFKTRSE VDHLEDGYRW RKYGQKAVKN  300
SPYPSVSCGV KKRVERSSED PEVVVTTYEG QHTHPSPVLA RGAHLPLPPP PLVLSERPPP  360
PLGFGFPSSV RSKDGHIPLL GSYLPPSPLD FRPMTAPQPL MLTSDPTTAV AISGDPRHGC  420
NRTAEVSIRD HGLLQDLIPS KIRKEEEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	2e-32	WRKY family protein