PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03027.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GATA

Protein Properties

Length: 345aa MW: 36101.9 Da PI: 5.8474

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	56.3	4.4e-18	241	275	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C+t kTp+WR gp g+ktLCnaCG++y++ +l RWW03027.1 241 CLHCQTDKTPQWRTGPMGPKTLCNACGVRYKSGRL 275 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MEAPENCHCG IGRAGNPQCA PERKASGGAG GDQFVVEDLL DFSNEEEEEE EEEAEALAGG 60 GDDGVAGSST DSSTVTAVDS CSNSSSGPEP HPSSDIVCRS FADANLSGDL CEPYEELAEL 120 EWLSNFVEQS FSSEDLHKLH LISGANSTAS STTAAAASGR ANQVASLRAE APVTGKARSK 180 RSRGAPCSWS SRLLVLSPSL TAASSSESEL IVPPGAAAGK KAARKKDPPA AAAAAADGRK 240 CLHCQTDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR PAASPTFVVS KHSNSHRKVL 300 ELRRQKELQQ QQPQKQLLQA ASSGASTPVA AANFLIHGPD IRHLI

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MEAPENCHCG IGRAGNPQCA PERKASGGAG GDQFVVEDLL DFSNEEEEEE EEEAEALAGG  60
GDDGVAGSST DSSTVTAVDS CSNSSSGPEP HPSSDIVCRS FADANLSGDL CEPYEELAEL  120
EWLSNFVEQS FSSEDLHKLH LISGANSTAS STTAAAASGR ANQVASLRAE APVTGKARSK  180
RSRGAPCSWS SRLLVLSPSL TAASSSESEL IVPPGAAAGK KAARKKDPPA AAAAAADGRK  240
CLHCQTDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR PAASPTFVVS KHSNSHRKVL  300
ELRRQKELQQ QQPQKQLLQA ASSGASTPVA AANFLIHGPD IRHLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	2e-48	GATA family protein