PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02959.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRF

Protein Properties

Length: 365aa MW: 40451 Da PI: 8.2633

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.7	5.6e-25	89	132	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg+srsrk++e RWW02959.1 89 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKSRSRKPVE 132 79***************************************997 PP
2	QLQ	48.9	2e-17	21	55	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L+ Q+l++Ky++++ vP++L++ i+ RWW02959.1 21 PFTASQWQELELQALVFKYMVSGISVPSDLILCIR 55 9******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
CGSEQSSESR MMMMGGGSRY PFTASQWQEL ELQALVFKYM VSGISVPSDL ILCIRRSLFV 60 DPQALPFIPN PPTIGWGAYQ LGDGRKPVDP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM 120 HRGKSRSRKP VELSLATNPT SSQFSSSNFA AAAAAAAAAA AAPPPPPPLS LSTPQTHHFL 180 LPCPSSSRPP AMGFSHKDDS SSFCLDSSPY TVDNYRAGRE MPCRLGSMDM SSVEETKQSF 240 GYLQGTHPHS RICLSEEQEK EKHYFVLGAD LKTEKSAKLE RERVEQPQNA RPFHCFLDEK 300 PQKVEDSWMS MDADLKMQLS ISIPMANHDK PVAASQRYNG ALLNASSALF LIPIKTLSSH 360 FPMVL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

CGSEQSSESR MMMMGGGSRY PFTASQWQEL ELQALVFKYM VSGISVPSDL ILCIRRSLFV  60
DPQALPFIPN PPTIGWGAYQ LGDGRKPVDP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM  120
HRGKSRSRKP VELSLATNPT SSQFSSSNFA AAAAAAAAAA AAPPPPPPLS LSTPQTHHFL  180
LPCPSSSRPP AMGFSHKDDS SSFCLDSSPY TVDNYRAGRE MPCRLGSMDM SSVEETKQSF  240
GYLQGTHPHS RICLSEEQEK EKHYFVLGAD LKTEKSAKLE RERVEQPQNA RPFHCFLDEK  300
PQKVEDSWMS MDADLKMQLS ISIPMANHDK PVAASQRYNG ALLNASSALF LIPIKTLSSH  360
FPMVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-47	GRF family protein