PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW02616.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 243aa MW: 26328.9 Da PI: 6.513 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.4 | 6.9e-34 | 141 | 198 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k RWW02616.1 141 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSV-DGQITEIVYKGTHNHPK 198 8****************************************.***************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MASSTASLET SASSRQHADA FSFATASFSE LLAAGDPGED YSFRGFSETF GSDGVGLPKF 60 KSIPPPSLPI SPPPISPSSY FAIPAGLSPT ELLDSPVLLS SSVREQHQQP WMQARADGSR 120 SLESNSAHCA QPVQTLQRRS DDGYNWRKYG QKQVKGSENP RSYYKCTYPN CPTKKKVERS 180 VDGQITEIVY KGTHNHPKPQ SNRRNSAARA SAPSEVNEHS LIESAATPDN SSISFGDDDL 240 EIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 4e-37 | WRKY family protein |