PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02456.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YB

Protein Properties

Length: 315aa MW: 32964.3 Da PI: 10.2254

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.1	4e-56	130	225	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianv+rimkk+lPanakiskdaketvqecvsefisf+t+eas+kcqrekrkt+ngddl+wa++tlGfedyv plkvyl+k+relegek RWW02456.1 130 REQDRFLPIANVGRIMKKALPANAKISKDAKETVQECVSEFISFITGEASEKCQREKRKTVNGDDLIWAMTTLGFEDYVPPLKVYLQKFRELEGEK 225 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
LWTRPQFPAF LRAGPTPRRR MDDHQHANCI NGGEGTRLGP YLTEKQTALL SPRVTLAALL 60 GPRSKGPYRS SSVPLPSSAL ASAGPRSSSG GRKLQSIDPL VASTDACLTW KNLFNSANHA 120 AGRGGVCSPR EQDRFLPIAN VGRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASE 180 KCQREKRKTV NGDDLIWAMT TLGFEDYVPP LKVYLQKFRE LEGEKLVSSG LQKEPGGSGG 240 SAGGIGVNAH GFNAGGSNSV GAYGSADGMM MVMGQPLHGP SYRHPVAMGG KASSGGGGGG 300 SSSSSAGIGR HDGRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	297	GGKASSGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-66	NF-YB family protein