PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW01998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 24128.1 Da PI: 5.4745 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.3e-18 | 79 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +g+++AeIrd + +g r++lg+f+tae Aa +++a+ +++g RWW01998.1 79 PCYRGVRKRP-WGKFAAEIRDSTRRG--ERVWLGTFDTAEAAALVYDQAAFSMRG 130 68********.**********43343..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MFTDVRQPRR RTTNLPTSQF TMDPSYLQSQ SYDEISVEDS CRLPFDVNDS DEMLLFDTLA 60 EATPSNPVGA GEGRPTGDPC YRGVRKRPWG KFAAEIRDST RRGERVWLGT FDTAEAAALV 120 YDQAAFSMRG RLAVLNFPVE QVQESLQELE CNKDNCSSVM ALKKKHSLRG RRRRRGPSVS 180 GTNKVAQSRI QSVLELEDLG TDYLEELLRV SELA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-45 | ERF family protein |