PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01686.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 398aa MW: 43865.6 Da PI: 8.3346

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.4e-05	51	71	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H RWW01686.1 51 CEICGKGFQRDQNLQLHRRGH 71 *******************88 PP
2	zf-C2H2	13.1	0.00028	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ RWW01686.1 125 WKCDKCSKRYAVQSDWKAHSKTC 147 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MTNTSEWSFP LLSSIFDGSI SLTKLFVSTD PEAEVIALSP RTLLATNRFL CEICGKGFQR 60 DQNLQLHRRG HNLPWKLKQR SGKEPRKRVY VCPEESCIHH NPARALGDLT GIKKHFCRKH 120 GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR EYRCDCGVLF SRRDSFITHR AFCDALAEET 180 TRVSVAAAYT MTNTTSIGSV DSLLQDGVTT PNIWKHLSPN LKPNITDREV GQQDRHGCSS 240 WMMGHGGQLD NAFDGTTAMS EINQAGLVDS QLSWIHGNKL SSLPTSNTLK PLTGTVPSLF 300 TSLPHRPAPD ISATALLQFA AQVGATSTTP FSGSFGDGSV FDGLLIRNAV DEFAASNTDE 360 VYMTRSRSML RDCLGGETRD FLGVGVQTLC QPSANGWI

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MTNTSEWSFP LLSSIFDGSI SLTKLFVSTD PEAEVIALSP RTLLATNRFL CEICGKGFQR  60
DQNLQLHRRG HNLPWKLKQR SGKEPRKRVY VCPEESCIHH NPARALGDLT GIKKHFCRKH  120
GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR EYRCDCGVLF SRRDSFITHR AFCDALAEET  180
TRVSVAAAYT MTNTTSIGSV DSLLQDGVTT PNIWKHLSPN LKPNITDREV GQQDRHGCSS  240
WMMGHGGQLD NAFDGTTAMS EINQAGLVDS QLSWIHGNKL SSLPTSNTLK PLTGTVPSLF  300
TSLPHRPAPD ISATALLQFA AQVGATSTTP FSGSFGDGSV FDGLLIRNAV DEFAASNTDE  360
VYMTRSRSML RDCLGGETRD FLGVGVQTLC QPSANGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-107	C2H2 family protein