PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01600.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GATA

Protein Properties

Length: 325aa MW: 34297.5 Da PI: 6.5029

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	54.7	1.4e-17	236	269	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C kTp+WR gp g+ktLCnaCG++yr+ + RWW01600.1 236 CTHCDIQKTPQWRAGPMGPKTLCNACGVRYRSGR 269 *******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEDGMGDLFD HIDDLLDGDD VMALVDDAAA ALLLPPLPLV SVADPVTAAD GGLDSLDCSS 60 DRNAELDVLR LEWTPPKFLY DSSDAFSLDL PSCDAIANDA DDNGARTKAR CDSLVSALGA 120 NATGSGDTPA SSSSCSTSAS YFAGGNSARA MIPTVVPTRA RSKRQRPPTF MPQPPSSDVV 180 LAPHPLSAAS DSDPESFGES CPPPPPPKKK KRKKKKKAAA AAEGDEPGSP PPSRKCTHCD 240 IQKTPQWRAG PMGPKTLCNA CGVRYRSGRL FPEYRPAGSP TFVPSLHSNS HKKVVEMRNK 300 ANHSAAAPRA SSDGCDLLGY IRRKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	213	PKKKKRK
2	208	213	KKKKRK
3	208	214	KKKKRKK
4	208	215	KKKKRKKK
5	208	216	KKKKRKKKK
6	209	215	KKKKRKK
7	209	217	KKKKRKKKK
8	210	216	KKKKRKK
9	210	214	KKRKK
10	211	217	KKKKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54810.2	6e-37	GATA family protein