PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01497.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRF

Protein Properties

Length: 538aa MW: 59726.5 Da PI: 8.3546

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	37.9	3.2e-12	358	379	1	22
WRC 1 daepgrCrRtDGKkWRCsrrvl 22 d+epgrCrRtDGKkWRCsr+v+ RWW01497.1 358 DSEPGRCRRTDGKKWRCSREVV 379 689*****************96 PP
2	QLQ	50	8.7e-18	279	314	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L+ Q+l+yKy++a++ vP eL+++i++ RWW01497.1 279 YFTLAQWQELELQALIYKYMLAGVSVPLELILPIKR 314 7*********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MQGEGGKEAA NEEDGGKRRE ERERESRIVS FTKEGRCGGG GTEGRGKRLG GVRRGQEHYV 60 RSEPMGRVHV PQRVNRGAHP EEGMGWWVPM PLATGPSCSR TLVAVPVKEK MSPCENRETT 120 YWVKADASDF GGNPSLLEGN PMPVSFFFAA SPLKLQDIEI VHIAGVLITV PICKFPPTGF 180 CRSTKWQIEA KSKARHDREM RKQRGRGEQL KCQITDHLQP QWLLFWLPRL RHGGRDDATA 240 MVRPLRHLRY LAMFAHYKPH LLLVIFETGP VDGDRGIGYF TLAQWQELEL QALIYKYMLA 300 GVSVPLELIL PIKRSLLSAA SPYYYHPELY QHLQPSCNYS TLLAPFSGVV SWGRCAVDSE 360 PGRCRRTDGK KWRCSREVVI VTVGRSFESN CSNLFLQELQ DSKPEGYVLQ RFLDEWPRSQ 420 QESDDGLIHT SHPASTTHLS ISLAGNPASD FSLKLSTGNN GEKQQRPEEG SSNGGGEEDG 480 RVVRPGNHWS GWGHHGEEAT MGGGPLAEAL RSAASTQSPT SVLHKPNGSV SETSSISP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MQGEGGKEAA NEEDGGKRRE ERERESRIVS FTKEGRCGGG GTEGRGKRLG GVRRGQEHYV  60
RSEPMGRVHV PQRVNRGAHP EEGMGWWVPM PLATGPSCSR TLVAVPVKEK MSPCENRETT  120
YWVKADASDF GGNPSLLEGN PMPVSFFFAA SPLKLQDIEI VHIAGVLITV PICKFPPTGF  180
CRSTKWQIEA KSKARHDREM RKQRGRGEQL KCQITDHLQP QWLLFWLPRL RHGGRDDATA  240
MVRPLRHLRY LAMFAHYKPH LLLVIFETGP VDGDRGIGYF TLAQWQELEL QALIYKYMLA  300
GVSVPLELIL PIKRSLLSAA SPYYYHPELY QHLQPSCNYS TLLAPFSGVV SWGRCAVDSE  360
PGRCRRTDGK KWRCSREVVI VTVGRSFESN CSNLFLQELQ DSKPEGYVLQ RFLDEWPRSQ  420
QESDDGLIHT SHPASTTHLS ISLAGNPASD FSLKLSTGNN GEKQQRPEEG SSNGGGEEDG  480
RVVRPGNHWS GWGHHGEEAT MGGGPLAEAL RSAASTQSPT SVLHKPNGSV SETSSISP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-21	GRF family protein