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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW01470.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | E2F/DP | ||||||||
| Protein Properties | Length: 314aa MW: 35003.9 Da PI: 8.6495 | ||||||||
| Description | E2F/DP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | E2F_TDP | 42 | 1.6e-13 | 20 | 67 | 1 | 56 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLeal 56
rk+ksL+ll+ + l+++ + + l+++a++L v +rRRiYDi+N++e++
RWW01470.1 20 RKQKSLGLLCAN---LYNRDGIDSIGLDDAARRL---GV--ERRRIYDIVNIMESV 67
79**********...9999999************...**..*************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 314 aa Download sequence |
MSSSSSHPLD AGMRHHAYSR KQKSLGLLCA NLYNRDGIDS IGLDDAARRL GVERRRIYDI 60 VNIMESVGED LEDELDESPE QYADEGDEKP SQIINSSSLS SGACCKARSG VCFTMENEKE 120 ENALCFLIFL VVIWALQTQV EARKPAFRWL GLKDGKVKAD NNVKVVAPGP KKLTKRAFGT 180 EITNVNSKKS RPNLPADKKP MKVQMKSEDL NECNRVAMKQ LGSKSGYAFG PFHPNGVMKR 240 GADVEVKCGK GVRDWDSLAA SFRPHLTHNN LFLVALSELF AHYVEAWKTW YVEATKGSRN 300 LQQHLSKLVT SDLL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G48160.1 | 1e-23 | E2F/DP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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