PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW01280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 221aa MW: 24664.4 Da PI: 6.505 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 73 | 4e-23 | 24 | 81 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqKe+ g+++pr +r t gC + k+v+rs++dp+v++itY+geH+++ RWW01280.1 24 LDDGHTWRKYGQKEILGAKYPRCTHRNTV-GCLAMKQVQRSDDDPSVFDITYRGEHTCP 81 59*******************86666553.9**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MCRKTLPKWT SQIRISSSEG VDALDDGHTW RKYGQKEILG AKYPRCTHRN TVGCLAMKQV 60 QRSDDDPSVF DITYRGEHTC PQKPRTVATS ALHQPDIHQS QQRPRQDQQL LLSFQTSLKV 120 KTEGSSFEDT DQNSPFSFRS TPMSTLSTPF SAAFTSPATS ESKYFGDAPP LHMTESDLTD 180 IIYATTSAAT SSSTMDISFM LDSVGFDPAF HFDASSFLHN F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 1e-31 | WRKY family protein |