PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW01228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25446.6 Da PI: 6.0481 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 94 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +++g RWW01228.1 94 SYRGVRKRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 144 69*******.**********422...25*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MDYSLLQSLH SPESSTGSGS GHPFPWTGVG LFYPDVPVPF DLNDSEEMLL LGMLAEASGK 60 GWSSSEACER SPAQPKEEEV NSQSKVAGDP KEKSYRGVRK RPWGKFAAEI RDSTRHGIRV 120 WLGTFDSAEA AALAYDQAAF SMRGSTAVLN FPVDRVRESL NGMKCWEAEG VSPVVALKRK 180 HSMRRKSMSK KAKQSETSSR SAESVLELED LGAEYLEQLL TTSEVVSIHA QC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-41 | ERF family protein |