PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW00962.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 28755.6 Da PI: 5.1964 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.1 | 2.3e-30 | 79 | 136 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C++kk++e+s+ d++++ i+Y+g+H+h+k RWW00962.1 79 EDGYNWRKYGQKHVKGSEYPRSYYKCTHPNCEMKKQMECSH-DGQITGIIYKGHHDHPK 136 8***************************************9.***************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 258 aa Download sequence |
MQSQNQSQGQ NLVASENEST LSEYVLNSAI EVTDSRVCRP AEAASGELQL TKCSVQNTRM 60 FQSYPSEPIS SSMLEKAAED GYNWRKYGQK HVKGSEYPRS YYKCTHPNCE MKKQMECSHD 120 GQITGIIYKG HHDHPKPQSR CRLAAGTMLI SHEEEKTDKL SSLMSVEDWN LKFPDESTNA 180 PDHTYHQIDP NSINESPETG GGQSNDCDEV AGGGHLESKR RKLESANNDA ALIGKTNHEP 240 RIVVQTLSEV DILDDGYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G26640.1 | 5e-52 | WRKY family protein |