PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW00795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 306aa MW: 33741.4 Da PI: 7.3068 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.6 | 5e-12 | 39 | 86 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 g+WT+eE + + da +++ g+ +W+++a+ ++ g+t +++s+++ + RWW00795.1 39 GSWTQEENKWFEDALAKFDGDtpdRWAKVAALIP-GKTVGDVVSHYREL 86 89********************************.***********975 PP | |||||||
2 | Myb_DNA-binding | 42.1 | 2e-13 | 149 | 193 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E++l++ + +++G+g+W+ I+r + +Rt+ q+ s+ qky RWW00795.1 149 PWTEDEHKLFLLGLRKYGKGDWRNISRNFVITRTPTQVASHAQKY 193 8*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MMTRPWMDVL PGKEAAPPHS YCTNWFVGQQ SSDAGSGSGS WTQEENKWFE DALAKFDGDT 60 PDRWAKVAAL IPGKTVGDVV SHYRELVDDV TEIEAGRIAC PVYYGTSSFT LDWENSHDSE 120 AWKNSYCVGG GAKRSGARSS DHERKKGVPW TEDEHKLFLL GLRKYGKGDW RNISRNFVIT 180 RTPTQVASHA QKYFIRLNSG SKDKRRSSIH DITSVDLPDN RPPSPSSQPS TVTTQSSLAL 240 TPSLSGQFSA IADPDQLGEV ASGFNPSSSH GHRFMQCQFG TNPFGMNLHA QSPQTGKCDQ 300 ANLRIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-77 | MYB family protein |