PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW00790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 242aa MW: 26265.9 Da PI: 11.2202 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.9 | 7.4e-11 | 203 | 240 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++ + RWW00790.1 203 RGHWRPAEDSKLKQLVELYGPQNWNLIAEKLE-GRSGSE 240 899*****************************.***976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGGTYRSVRL PIRGPPATGR FYQNSTVGGR LKKKSTVGGR LRKKKGRRGK EKKKKRGRKN 60 TSPARRPRPP TVAARGLPAR RPCPPAVAAR GLPARRRRYL ETVQLTRTGG LPCMASRCYA 120 DSSPASSAKG VPSQTDSLSF NTASSVESHR CGCCTLPFME SCLSLQENLQ QTSEVSHDKY 180 LLGENTTGGS GAAESGQSKP CARGHWRPAE DSKLKQLVEL YGPQNWNLIA EKLEGRSGSE 240 LS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 56 | RKKKGRRGKEKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 3e-17 | MYB family protein |