PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW00538.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 887aa    MW: 98762 Da    PI: 5.873
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW00538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.95.1e-1153977661371
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d++ a++lL+++++++sp gd++qRla+ f+ +L+arla+++s++y++l++++ +   ++++l+a++l+  v+P+ k+sh+   
  RWW00538.1 397 LRTLLTHCAQAVAADDHRSANELLKQIRQHSSPFGDANQRLAHWFADGLQARLAGTGSQIYHSLTAKRIP---VTDVLKAFQLYTAVCPFRKVSHFFST 492
                 5789***************************************************************999...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 q+Il+ +e+++r+HiiDf++ +G+QWp++lq L+ Rp+gpp++R+Tg++ p +g   +e + etg+rLa++A+++++pfef+ ++a +++d+ +e+L++
  RWW00538.1 493 QTILNVAEKATRLHIIDFGMYYGFQWPCFLQRLSYRPDGPPKVRMTGIELPVHGfrPTELIDETGRRLADYASSFRIPFEFRSIAAAKWDDIGVEDLDL 591
                 ****************************************************99*999999***********************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 + gE+++Vn+ ++ ++llde++ ++++rd+vL+++++++P+v+++   +  ++++ F++rf eal +ys++fd++e+++p+e+e r+ +E++l+gre+ 
  RWW00538.1 592 RDGEVVVVNCLYRFKNLLDETLVVDNPRDKVLNTIRKINPDVFIHGVVNGTYSAPFFVTRFREALFHYSSMFDMIETNAPQEDESRQLIEKVLFGREAL 690
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                 n++aceg+er er et+++W+ r  +aGF ++pl+ +++k+a   ++ ++ + + v+e++ +l++gWk+r ++++S
  RWW00538.1 691 NIIACEGTERLERPETYKQWHVRNLRAGFVQLPLNPDIVKKATDKVKSCYHKDFVVDEDNRWLLQGWKGRIIYAFS 766
                 **************************************************889********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 887 aa     Download sequence    
MGTGIRDLRG VMNGFKHDQL FPDPITANGL KLKGLPPPTT AAHLDGFIDM QDGPFLQAPS  60
DSALDAIAPP SFLDDLFTEE DALNSLDLGG QQQSSNLADD HPGLRLSLGT PNANLSPGTE  120
TDTLDDSEIF FSDIGLNYIS QMLMEENIDD KFDVYLENPA LFDAENPFFE ILGENFTASP  180
GQPPLCSSHF SDSSDGNHHG SSGSSTVMDN SQLYDASETH PVPIDDSPQS SFSSVNSFGD  240
ILEGVKESLL STLVAPDLPA DSQPAWQFQR GIEEAHKFLP SDDKLVINIE HAVEVKAEGG  300
VNEHAVHPSR GRKNRHGEDL DLEEGRSIKQ SAVFSEETRR TKLFDEVLLC NEGNCAKAVD  360
KFRERLQNEA SKVSHGSHSR GRKGRGKKQP KREVVDLRTL LTHCAQAVAA DDHRSANELL  420
KQIRQHSSPF GDANQRLAHW FADGLQARLA GTGSQIYHSL TAKRIPVTDV LKAFQLYTAV  480
CPFRKVSHFF STQTILNVAE KATRLHIIDF GMYYGFQWPC FLQRLSYRPD GPPKVRMTGI  540
ELPVHGFRPT ELIDETGRRL ADYASSFRIP FEFRSIAAAK WDDIGVEDLD LRDGEVVVVN  600
CLYRFKNLLD ETLVVDNPRD KVLNTIRKIN PDVFIHGVVN GTYSAPFFVT RFREALFHYS  660
SMFDMIETNA PQEDESRQLI EKVLFGREAL NIIACEGTER LERPETYKQW HVRNLRAGFV  720
QLPLNPDIVK KATDKVKSCY HKDFVVDEDN RWLLQGWKGR IIYAFSRLRA SHIIPSSLSS  780
DISSSTRSCI LPSPVAKATV DSTVRFNIDR LATIAPLLLS CSHCSAVAPS SSDTSKVLEL  840
YYCRTTSNEQ QRYTTPSTAP KSILVAPATI AEAPKASATY YIIHTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein