PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW00482.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 234aa MW: 26221.5 Da PI: 9.4752 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 21.3 | 7.1e-07 | 64 | 86 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F+r nL+ H r H RWW00482.1 64 FVCEVCSKEFRRDQNLQIHRRGH 86 89*******************88 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
APVSYSEIVH HHPYPSPNPN PSNDRDPLID RRPKRKRNLP GTPGKSLAEV IALSPGTLLA 60 ASSFVCEVCS KEFRRDQNLQ IHRRGHNLPW NFAAKKASSD EAAARGRRRV YVCPEASCVY 120 HDPSRALGDL TGIKKHYSRK HGEKKWECEW CSKKYAVRAD WKAHSKICGT REYECHCGTL 180 FASRKDSLLA HQAACEATTT TTTAEEREAI TVNRELLFPS LWGRSTERAG NNGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50700.1 | 3e-66 | C2H2 family protein |