PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW00151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 135aa MW: 14764.3 Da PI: 10.0439 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.5 | 8.2e-17 | 2 | 53 | 11 | 57 |
HHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 11 qleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ql++Le+ F++ n +ps+++++e+ ++l +++e++V++WFqNrRa+ k+ RWW00151.1 2 QLQTLESIFYRgNGTPSKQKIKEIVAELsrhgQISEANVYNWFQNRRARSKR 53 9*********99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 79.7 | 3.7e-26 | 2 | 54 | 12 | 64 |
Wus_type_Homeobox 12 QikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 Q++ Le+++++G tP+k++i++i aeL+++G+i+++NV++WFQNr+aR+++k RWW00151.1 2 QLQTLESIFYRGNGTPSKQKIKEIVAELSRHGQISEANVYNWFQNRRARSKRK 54 9***************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MQLQTLESIF YRGNGTPSKQ KIKEIVAELS RHGQISEANV YNWFQNRRAR SKRKATRTAA 60 APSNTESESE ATSLAKTETA AAAYSNLSPS VYYDRSPASN GRTQGMYEEA PESSKFSGGS 120 DGMRVFGVST SINPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 4e-19 | WOX family protein |