PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV99627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 225aa MW: 24850.8 Da PI: 9.1042 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 105.6 | 6.1e-33 | 5 | 78 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + kewyfFs d+kyatg+r+nrat+sgyWkatgkd++v++ +g lvg++ktLvfy+grapkg+kt+Wvmhe+r+ RWV99627.1 5 GGKEWYFFSLPDRKYATGQRTNRATQSGYWKATGKDRQVIR-GGLLVGMRKTLVFYQGRAPKGRKTSWVMHEFRM 78 568*************************************9.9******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MACVGGKEWY FFSLPDRKYA TGQRTNRATQ SGYWKATGKD RQVIRGGLLV GMRKTLVFYQ 60 GRAPKGRKTS WVMHEFRMVA GADDPQNLSL KEDWVLCRVL DKSRAVRGGP AMEEAGDGED 120 ISSSSLPPLM DGYLTFEQVS CFSNLGPVHP ASGRTHEANL SSLFARSLQT RSSSAHAGGL 180 PSLDSSENVV STVSNYFTKL DSNPWREEAP RSSDGNVNSY LWNPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.1 | 3e-60 | NAC family protein |