PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV99314.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 371aa MW: 40303.1 Da PI: 10.0751

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV99314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	61.9	1.7e-19	193	264	24	95
DUF260 24 aeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 ++q++++ +v+k+FG++ ++++++a+p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++l+q+++e++ RWV99314.1 193 EAQAHATVFVAKFFGRAGLMSFISAVPPSQRPALFQSLLFEACGRTINPVNGAVGLLWAGNWHLCQEAVETV 264 467899*************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MVHYRPKSPQ VLTRHTRIYK SKLAAKQTKL GLLSLLQARF LLYKVVGRAI WPQREHQSLS 60 SGGGGGRWPQ LLLRFDLSPF GEGRICERTN GPWQRNQNGG EGGTDQPRQH GEGHPPPETP 120 MSLEPLPTHP KAVTTPPQYL KYLNSKVELP NPRCPLYIPP FPSPPLHPSF SLPRSSLPLA 180 SPLKSPGWID SAEAQAHATV FVAKFFGRAG LMSFISAVPP SQRPALFQSL LFEACGRTIN 240 PVNGAVGLLW AGNWHLCQEA VETVLGGGTL RPLLGHCDDE TPEADGPCPR PRIGFSSFSA 300 AKRRKAPAPS DAAAACDLDL CLTRRLPGGG FEEKRRRRPA TPSMNSEGSV TTSGGESDSS 360 TAEPRLLNLF A

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MVHYRPKSPQ VLTRHTRIYK SKLAAKQTKL GLLSLLQARF LLYKVVGRAI WPQREHQSLS  60
SGGGGGRWPQ LLLRFDLSPF GEGRICERTN GPWQRNQNGG EGGTDQPRQH GEGHPPPETP  120
MSLEPLPTHP KAVTTPPQYL KYLNSKVELP NPRCPLYIPP FPSPPLHPSF SLPRSSLPLA  180
SPLKSPGWID SAEAQAHATV FVAKFFGRAG LMSFISAVPP SQRPALFQSL LFEACGRTIN  240
PVNGAVGLLW AGNWHLCQEA VETVLGGGTL RPLLGHCDDE TPEADGPCPR PRIGFSSFSA  300
AKRRKAPAPS DAAAACDLDL CLTRRLPGGG FEEKRRRRPA TPSMNSEGSV TTSGGESDSS  360
TAEPRLLNLF A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37540.1	5e-47	LBD family protein