PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV99141.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 300aa MW: 33426.7 Da PI: 10.9821

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV99141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.8	7.8e-20	71	163	2	87
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergf.erspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqlea 87 Wt++e+laLi a+r+++ +lrrg+ ++ +W+ev++ + +++ ++++qC++k e+l+kry+ +++ + + + + ss+++yf++++a RWV99141.1 71 WTHEETLALIGAYRDKWYALRRGNFRASHWQEVADDVadrcPSGPSpPKTSVQCRHKVEKLRKRYRSERHKSLQLdtSLPPSSSWVYFRKMDA 163 ********************************999777744444489***************9988776533456789*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MAFSADASSP KKDSPFAAVL AAFSAAEAAA SRCQSPSPSP KRSASLLSLP GSLPPPLPSS 60 SASRRLAAPI WTHEETLALI GAYRDKWYAL RRGNFRASHW QEVADDVADR CPSGPSPPKT 120 SVQCRHKVEK LRKRYRSERH KSLQLDTSLP PSSSWVYFRK MDAMEHGGSV EVGEPHRPSA 180 CQSPAPHHPP SSDDEENDDY EHRGAGGGSN TRSLHHLMTN GGGAIGELRF TIPKSVRSKV 240 YRADDRVAPN PSMNPNATTR FFKGFSGVRA VMEEMRRKME KKRRRRMEMV RVRSGRWRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	286	RRKMEKKRRRR
2	281	286	KKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-31	Trihelix family protein