PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV98983.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 193aa MW: 21291.3 Da PI: 10.6588 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.9 | 3e-10 | 11 | 49 | 12 | 48 |
HHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 lv + ++ G+ +W++Ia +++ +Rt++++k++w+++l RWV98983.1 11 LVAGLQRCGKScrlRWSAIATHLP-KRTDNEIKNYWNTHL 49 78899999988999**********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MVAECCDVRS LVAGLQRCGK SCRLRWSAIA THLPKRTDNE IKNYWNTHLK KRLAKMGIDP 60 CTHKAKSDTL SSGDGHLKSV ANLSHIAHWE SARLEAEERL ARESKFRPAP NSMILQQQQQ 120 HMGSSSSSSS TVPPPPAPLT TKAGGLDVLR AWAPRRQDRP GVSHFHLELR RQPASGLWTP 180 APAPHPPPAI KEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 8e-33 | MYB family protein |