PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV98398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 196aa MW: 21149.7 Da PI: 6.392 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 53.7 | 4.2e-17 | 91 | 128 | 22 | 59 |
EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sYYrCt+++C+vkk+vers++dp++v++tYeg+H h+ RWV98398.1 91 ASYYRCTHSKCNVKKRVERSSQDPSIVITTYEGQHCHH 128 59*********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MEEGLPPLSD ASSSWKFSAD GASVSIASLH DLYVGEGLDW GLPGGIGDGL PPAFDLPSWV 60 AEEPRSSDAA TVVAASSSSD ERPGGIPSEK ASYYRCTHSK CNVKKRVERS SQDPSIVITT 120 YEGQHCHHTV SPPSQQIRLP AMRFHRNPPM IPVIHPGQAI GPRYQERTPL PMERTSPAPT 180 GEGLLDDVVP SGMRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 8e-21 | WRKY family protein |