PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV98346.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 180aa MW: 19197.1 Da PI: 7.372

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV98346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.5	1.1e-43	19	118	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCkvlrr+C+++Cvlapyfp ++p+kf n+h++FGasn++kll+++p ++r da+ss+vyeA+ar+rdPvyG++g i++lq+q+++l+a+la++++ RWV98346.1 19 PCAACKVLRRRCVDKCVLAPYFPPTDPQKFTNAHRVFGASNIIKLLQDIPVSQRADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVNELQAQLARAQA 117 7**********************************************************************************************9997 PP DUF260 100 e 100 e RWV98346.1 118 E 118 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
PATPPLPRPP STPATVLSPC AACKVLRRRC VDKCVLAPYF PPTDPQKFTN AHRVFGASNI 60 IKLLQDIPVS QRADAVSSMV YEANARIRDP VYGCAGAIFQ LQKQVNELQA QLARAQAEAI 120 NVQAQNANLM ALICMGMSHT LHDGAALAVD ALAAAPLNDS FSLDDGSLHG GAIWEAPIWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	4e-60	LBD family protein