PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV97076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 113aa MW: 12680.3 Da PI: 4.3445 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 45.2 | 2.6e-14 | 5 | 59 | 47 | 101 |
DUF260 47 kalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 +++p e+r++a++++++eA +r++dPvyG+vgvi+ lq++++ ++ ela++++++ RWV97076.1 5 QQIPVEQRRQAADAIAMEAYWRVQDPVYGSVGVISMLQREISVAQCELAETQAQI 59 78899*********************************************99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 113 aa Download sequence |
MCIPQQIPVE QRRQAADAIA MEAYWRVQDP VYGSVGVISM LQREISVAQC ELAETQAQIT 60 MYASQAQSQP NQIAAAQCLV EDVHLVPSQP SQPPFPGLYQ RDDIPQETLQ RHF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26660.1 | 3e-13 | LBD family protein |