PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV96894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 24700.3 Da PI: 6.3484 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 5.8e-16 | 58 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r+++ g+Wv+eIr+p+ + r++lg++ ta++Aa a++ a+ +l+g RWV96894.1 58 PSYRGIRYRS--GKWVSEIREPR----KaSRIWLGTYPTADMAAVAYDVAAHALRG 107 57*****976..*********94....36*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MADRASDMHR HPHVGSRPPP PEQQRQLPRE QGVNAAQPEG QPSDPRTRME RSGPRKHPSY 60 RGIRYRSGKW VSEIREPRKA SRIWLGTYPT ADMAAVAYDV AAHALRGGDA VLNFPDEIAS 120 RPAPASASPA HIRMAAAEAA ASLMPRAGAD DSSTAASHHH QQQQLGSNSE SSPGTEGKYV 180 DEDEIFDMPQ LLVNMAEGML MTPPRLSPHG SEDSPEASEG ESLWSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52020.1 | 7e-37 | ERF family protein |