PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV96883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 253aa MW: 28012.8 Da PI: 10.3233 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.4 | 5.3e-32 | 187 | 244 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYegeHnh RWV96883.1 187 DEYSWRKYGQKPIKGSPHPRAYYKCSSIrGCPARKQVERCLEDPSMLIVTYEGEHNHA 244 9************************9988****************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEEVEKANRA AVESCHRILS LLSQPQDQVL SQDLLAETKE AVSRFRRLVS LLSNSIGHGR 60 VRMVHKVQYP SNHKIFSDNH SSQFGPQAAS SSQHQPSLSS TRSFLSSLSM DRSVASLDGK 120 SFHPTGGLAA SSVHPPPKRR CICRGVDGDG KCATSQRCHC SKRRKLRVKR SVKVPAISNK 180 PADTPPDEYS WRKYGQKPIK GSPHPRAYYK CSSIRGCPAR KQVERCLEDP SMLIVTYEGE 240 HNHAGLLTQS AQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 8e-51 | WRKY family protein |