PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV96345.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 323aa MW: 36165.9 Da PI: 4.4585

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV96345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.7e-16	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEde l+ v++ G g+W+t +++ g+ R++k+c++rw +yl RWV96345.1 25 RGPWTSEEDEVLASFVRREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 72 89****************************99**********97 PP
2	Myb_DNA-binding	46.8	6.8e-15	83	123	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWV96345.1 83 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 123 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MAAMEVEDKQ RRGPTPCCSK VGLKRGPWTS EEDEVLASFV RREGEGRWRT LPKRAGLLRC 60 GKSCRLRWMN YLRPSIKHGP IAPDEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN 120 THLSKKLVSQ GVDPRTHKPL ATSDGDAILQ PIPPQLYRNP NPNPSTIPST APTLLRAEDT 180 QKNFSDGLNL QQNDDGDEWK NNECAVDRPL DQEEGNYDAG EDGGIGMECY TDDIFSSFLD 240 SLINDDIFEP QHNNVIDDEN NNDNSRSNNS DGSNQIMVPA AYADTAPSVP AFELGTFWGD 300 DLMAPTGIEE DVHEQFADDA GKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	7e-81	MYB family protein