PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV95796.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 283aa MW: 31670.8 Da PI: 9.4455 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.9 | 4.2e-33 | 149 | 206 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++Cpvkk+vers +dpk+v++tYeg+H+h+ RWV95796.1 149 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCPVKKRVERSYQDPKIVVTTYEGKHTHQ 206 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
ESPLVNFADA FRGSNMDYGV IARALGLSCP APSKFLCSSG TASRELMVDV GNGRKRLVPL 60 FGCSLGTTPV TPNSSISSSS TEAAREEDAE RCKKDEKKQG EEQKKQAKGD EEGRDKPKTL 120 RSTSKKKGEK RQREPAFAFV TKSEVDHLED GYRWRKYGQK AVKNSPYPRS YYRCTTQKCP 180 VKKRVERSYQ DPKIVVTTYE GKHTHQSPAA VRGSTHLVAP PRTMPMSFYH DLMMHQVPHL 240 SNTCQQGNVM DLANLPPALQ QLQFPEYGLL QDVLTSFDHD SQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 6e-47 | WRKY family protein |