PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV95700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YC | ||||||||
Protein Properties | Length: 183aa MW: 20908 Da PI: 6.5003 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 44.9 | 2.5e-14 | 43 | 80 | 1 | 35 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkaded 35 ql+ fw++q ie++tdfknh+lPlarikki+kaded RWV95700.1 43 QLQLFWADQyreIEQTTDFKNHSLPLARIKKIMKADED 80 89*****99999*************************9 PP | |||||||
2 | NF-YC | 37.7 | 4.4e-12 | 79 | 111 | 69 | 101 |
NF-YC 69 nkrrtlkksdiaaavtrtdifdflvdivprdel 101 +rrtl+k+diaaa++rtd+fdfl+divpr+e RWV95700.1 79 EDRRTLQKNDIAAAISRTDVFDFLIDIVPREEE 111 579***************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MDQPGHATPP LMGVAAGVPY AGGGPYQAYQ HLFHQQQQQQ QQQLQLFWAD QYREIEQTTD 60 FKNHSLPLAR IKKIMKADED RRTLQKNDIA AAISRTDVFD FLIDIVPREE EKEDVARPLG 120 APPTDPMSYY YVQHSINYVL FDKTNPKDLL VMWPVLVMGC VAQHCPIQFL VCLATSLCHV 180 KHC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 81 | 87 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 2e-31 | NF-YC family protein |