PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV95672.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 265aa MW: 28879.9 Da PI: 5.2693

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV95672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176	3.8e-55	82	186	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+ tdfknh+lPlarikki+kadedv+misaeaPv+++kacelfileltlrsw+h+eenkrrtl+k+dia a+trtdifdflvdiv RWV95672.1 82 QLQAFWANQlleIEQITDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACELFILELTLRSWIHTEENKRRTLQKNDIAGAITRTDIFDFLVDIV 180 89*****9999********************************************************************************** PP NF-YC 97 prdelk 102 prdelk RWV95672.1 181 PRDELK 186 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MEQSTQPPQP LIGVVSGAAQ IAYAAPTYQP TAVVSGAPAV AGVIPPPTQL TSAYPINPAS 60 IVSQHQLAYQ QVQQLHHQQL QQLQAFWANQ LLEIEQITDF KNHSLPLARI KKIMKADEDV 120 RMISAEAPVV FAKACELFIL ELTLRSWIHT EENKRRTLQK NDIAGAITRT DIFDFLVDIV 180 PRDELKEEGM GITRAAVGAP GEAIPYYYVP ATQVPGPGMV MGKPGDQAAV AAAVGTVYAV 240 EQPHSVAYLW QPPHAQQHEQ VPDGE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	161	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-67	NF-YC family protein