PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94856.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 677aa MW: 72799.5 Da PI: 6.2438

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	498	543	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L Av YI++L RWV94856.1 498 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAVSYINEL 543 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MNLWADDNAS MMEAFMGTTD LQGFPWAIAA VPPTPTPPSA AALGPVTATA TAAPAYLSQE 60 TLQQRLQALI EGARESWTYG IFWQSSVDGA TGASFLGWGD GYYKGCEDDK RKQRVASAVS 120 AVEQEHRRRV LRELHSLISG GGSSAPDENV DEEVTDTEWF FLVSMTQSFV NGGGLPGQAL 180 YAGAPVWVAG PDRLASAPCE RARQAHLFGL QTMVCVPVGS GVLELGSTDV VSHSPEIMGK 240 IRVLFLFSSP DVPSSSTAAA VVSWITPQPA AATPATDQGE TDPSVLWLTD PSAVEIKDSV 300 SPVTTAADIS VTKPRTQFEN NPSSSILTEN PSSSLQIQKS HHHHHHQQQH QGSSSNPQNQ 360 TLFSKLASNG SAAPQSTEPC SKRNPSPAPV AGGLFPHHQA AIAEAEDRKN KGSTGATSRV 420 TNQEAGMLCF SSAPARAPSD GQMKSSGGGG GIPDGPDSDH SDLEASAREV ESNRVVEPEK 480 RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA SLLGDAVSYI 540 NELRSNLQTM EAVKEELREQ VEALEKKLPV QPPPDYDLRT TTKGRCHGVE MEVKILGSEA 600 MIRLQCQKRN HPAASLMAAL KDLDLELHYA SVSVVKDLMI QQVTVKMSPG RPMTQEQLCA 660 SLYSRLAAEA PISSSSR

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MNLWADDNAS MMEAFMGTTD LQGFPWAIAA VPPTPTPPSA AALGPVTATA TAAPAYLSQE  60
TLQQRLQALI EGARESWTYG IFWQSSVDGA TGASFLGWGD GYYKGCEDDK RKQRVASAVS  120
AVEQEHRRRV LRELHSLISG GGSSAPDENV DEEVTDTEWF FLVSMTQSFV NGGGLPGQAL  180
YAGAPVWVAG PDRLASAPCE RARQAHLFGL QTMVCVPVGS GVLELGSTDV VSHSPEIMGK  240
IRVLFLFSSP DVPSSSTAAA VVSWITPQPA AATPATDQGE TDPSVLWLTD PSAVEIKDSV  300
SPVTTAADIS VTKPRTQFEN NPSSSILTEN PSSSLQIQKS HHHHHHQQQH QGSSSNPQNQ  360
TLFSKLASNG SAAPQSTEPC SKRNPSPAPV AGGLFPHHQA AIAEAEDRKN KGSTGATSRV  420
TNQEAGMLCF SSAPARAPSD GQMKSSGGGG GIPDGPDSDH SDLEASAREV ESNRVVEPEK  480
RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA SLLGDAVSYI  540
NELRSNLQTM EAVKEELREQ VEALEKKLPV QPPPDYDLRT TTKGRCHGVE MEVKILGSEA  600
MIRLQCQKRN HPAASLMAAL KDLDLELHYA SVSVVKDLMI QQVTVKMSPG RPMTQEQLCA  660
SLYSRLAAEA PISSSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	488	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-138	bHLH family protein