PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV94827.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 312aa    MW: 33801.3 Da    PI: 9.3324
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV94827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.15.1e-13226257135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C +  Tp+WR    g+ktLCnaCG++y++ +l
  RWV94827.1 226 CMHCASARTPQWR---MGPKTLCNACGVRYKSGRL 257
                 99***********...77799**********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MVWQRAMRLD MNFGMRTPAS FSASLATVAP LQDAAAPAYS YGLPSAADAL RVTDRLDLSG  60
RDLFPSAFGA DTPFLTAGET AETDSSFDLF VPVSTSTKNT PVAFFLFPFV FVFGFVSPLL  120
QIEEAGELEW LSQFVEDSFS DAPYQYTGLT TPATVNLLGV DQCVARRAAR SKRSRSSNPT  180
TVRSSFDFPP SKPDSIGIKC ISSRGGCSRG NKSGWGVRAE GGVRRCMHCA SARTPQWRMG  240
PKTLCNACGV RYKSGRLLPE YRPAANPAFV LTRHSNSHRK VMEILRHHKN QPPASAAAGA  300
TRSELLDGNG VC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.13e-39GATA family protein