PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV94673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 145aa MW: 15687 Da PI: 8.5005 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 47.9 | 3.9e-15 | 14 | 49 | 1 | 36 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhkl 36 +CaaCk+lrr+Ca dCv+ap+fpa++p+kfanvh++ RWV94673.1 14 PCAACKLLRRRCAWDCVFAPHFPADEPQKFANVHRV 49 7*********************************98 PP | |||||||
2 | DUF260 | 42 | 2.7e-13 | 50 | 89 | 61 | 100 |
DUF260 61 lvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 lvyeA+ar+rdPvyG+vgvi++l+ q++ l+a+la+++++ RWV94673.1 50 LVYEANARVRDPVYGCVGVISSLHCQVQALEAQLAMAQAQ 89 89**********************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MKEAGRQQHG TASPCAACKL LRRRCAWDCV FAPHFPADEP QKFANVHRVL VYEANARVRD 60 PVYGCVGVIS SLHCQVQALE AQLAMAQAQM VRLRMLAHLD LGRSPTGTGS TTTGSSSMCP 120 PSPIYTPGGH GDAAQTPMLS FSYER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 1e-35 | LBD family protein |