PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV94363.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 213aa MW: 23590.4 Da PI: 7.2753 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.6 | 1e-11 | 16 | 50 | 1 | 33 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..T CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..k 33 rg W++eEde+l+++++ +G +W+t+a++ g + RWV94363.1 16 RGLWSPEEDEKLIQYITSHGHSCWSTVAKEAGrpL 50 788****************************9664 PP | |||||||
2 | Myb_DNA-binding | 25.7 | 2.7e-08 | 60 | 81 | 24 | 46 |
HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46 W+ Ia++++ gRt++++k++w++ RWV94363.1 60 WAQIAKHLP-GRTDNEVKNFWNS 81 *********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
SLAMGHHCCS KQKVRRGLWS PEEDEKLIQY ITSHGHSCWS TVAKEAGRPL SLSLSLSLVW 60 AQIAKHLPGR TDNEVKNFWN SCVKKKLIAQ GLDPKTHNLI PAAARSNGAN SAEPPRFRYT 120 QTSTCTPFTI SSSIKSFDDM NNSMDMNPPP PFHETAAPVS NFQYQDIHVL MSFKDQNCFS 180 SSTSSLDHSN IASSSFHQPG FVDDCTWDST VDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 1e-43 | MYB family protein |