PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV94213.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 320aa    MW: 33849 Da    PI: 8.4814
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV94213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.85.3e-17227260134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C   kTp+WR gp g+ktLCnaCG++y++ +
  RWV94213.1 227 CMHCEIQKTPQWRAGPMGPKTLCNACGVRYKSGR 260
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MACMHGWGAV RNGAIYARLW NGQCDELDIV QLEWMSKFLD DTDSFSLDLP SSDGINNNAN  60
GEDNGVQTKA RGHHSIFRTS SPVSVLEADT MGGGGGGDSY SSSSSSSSTS ASYSNGGNET  120
TILLPPLSPP EPPSVLVVPA RARSKRPRPA TFAPRHHVAV PYLPPSSDAV AVPNPLSAAT  180
SSDPESIGES CPAPPSAAKK KIKKKSLATA ATGDGAESGP PPPVRKCMHC EIQKTPQWRA  240
GPMGPKTLCN ACGVRYKSGR LFPEYRPAAS PTFVPSIHSN SHKKVVEMRI KASQKCVTEG  300
ATTSSSSDGC DLLEYIRRRD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145149KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-40GATA family protein