PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV94133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 231aa MW: 26096.6 Da PI: 8.718 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.7 | 3.6e-20 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t++ + g+ R++k+c++rw +yl RWV94133.1 14 KGPWTPEEDQKLIDYIQKHGQGNWRTVPGKAGLARCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.2e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ +lG++ W++Ia++++ gRt++++k++w+++ RWV94133.1 67 RGRFSIEEEEAIIQLHGLLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRAPCCPKN GLKKGPWTPE EDQKLIDYIQ KHGQGNWRTV PGKAGLARCG KSCRLRWTNY 60 LRPDIKRGRF SIEEEEAIIQ LHGLLGNKWS AIAARLPGRT DNEIKNYWNT HIRRKLLGMG 120 IDPYPTARGE DQLASFQAQQ LRSNPSKTLP SSTASHDPFF DEAQLQPKLD VNPLQDIVIH 180 PNLVAAAGVN YGNLDPCFFQ PMVNTSNTYW NRNATSELLI ESDAVEFLRE Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-80 | MYB family protein |