PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV93684.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 280aa MW: 31413.1 Da PI: 8.0136

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV93684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1.1e-15	56	101	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v ++G+ +W+ Ia+++ gR++k+c++rw++ RWV93684.1 56 RGHWRPAEDAKLKELVSLYGPQNWNMIAEKLV-GRSGKSCRLRWFNQ 101 899***************************.*********996 PP
2	Myb_DNA-binding	57.2	3.8e-18	108	151	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++++eE+++l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWV93684.1 108 RKAFSEEEEDRLLAAHRLYGNR-WALIARLFP-GRTDNAVKNHWHV 151 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGYPAGEREC WGRDDLTGEH ERQGGGRSSS HRVMEEDGGG EGNTFESEQQ HKLCVRGHWR 60 PAEDAKLKEL VSLYGPQNWN MIAEKLVGRS GKSCRLRWFN QLDPRINRKA FSEEEEDRLL 120 AAHRLYGNRW ALIARLFPGR TDNAVKNHWH VIMARKQREK QQSSGCRRRK LPSLPPLSTP 180 SQPTCNNACS GESTTTRDES APTCTDLYLA MSNGLFPTGA PMVQARHGFD LSSVCTRTTF 240 EVSPNEPAAY RMTNALPSGE TNYENEKISL PFIDFLGVGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-68	MYB family protein