PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV93593.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 804aa MW: 88017.6 Da PI: 5.972

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV93593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.4e-13	649	695	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ + K++Ka+ L A+ YI +Lq RWV93593.1 649 NHVEAERQRREKLNQRFYALRSVVPNiS------KMDKASLLGDAISYITELQ 695 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MLMNLKEGGH CVVNQGEDLT TVDFDDNISL VEMEETIMLE LSSTVRLDRK DLKEGYRYVI 60 FRDEGLTTVD FDADGTETER PATPTPPAVN GDHGSVTAVV TWPPTPSHVS QTTERDWTVQ 120 IHPRLWLQEV GAEISRGKGK PCRGKDEHNV PFTVQNCDRF HVCVVDGRSE TDVLTPTCVG 180 EGRGGSGTGM GSFWSDEDRQ VAVAVLGHQA FDYLNALHTS LSDGHLTAVG GGDADLQTKL 240 QDLVEGTSSS CSSVSAWAYA IFWQISRSGS GDFVLGWGDG HCRELSDGEE EGRIRRYPLD 300 DANQKMRKRV LEKLHTLSGG SADENYALRL DRITDAEMYF LASMYFSFPK GEDAPGKALA 360 SRKHIWISEA GLNSPACSSY CVRTFLARSA GFRTILFVPF DTGVLELGSV DPVPESFEAL 420 HTIRSVFGQG RNKAAAAAAA GEKIGENHGT VSASRFGVGG HVAEYPKIFG MDLSLGHAQL 480 NERARALIVK PEQRPSELIT KHGDHHQNIP PTNGATVLQW NQSCIANSHQ PELGNGAPPH 540 ARHINGVVGQ DLLRTNQSQP QKPPPPAPQP RRLQPMSSHP LPQSGQIDFS TGEANSASVG 600 VSVGRLGAVD TELSDVEPPC KEDKPGTMEE RKPRKRGRKP ANGREEPLNH VEAERQRREK 660 LNQRFYALRS VVPNISKMDK ASLLGDAISY ITELQNKLKE MEAERETWGD PSFVDRKRRA 720 YMHPEIDVEA AQDEVIVRVS CPLDVHPVSK VIQALKDLQI DVVNSKVAAN SDSVLHTFVL 780 KAPGAEQPTK EKLIAALTQE LNAT

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MLMNLKEGGH CVVNQGEDLT TVDFDDNISL VEMEETIMLE LSSTVRLDRK DLKEGYRYVI  60
FRDEGLTTVD FDADGTETER PATPTPPAVN GDHGSVTAVV TWPPTPSHVS QTTERDWTVQ  120
IHPRLWLQEV GAEISRGKGK PCRGKDEHNV PFTVQNCDRF HVCVVDGRSE TDVLTPTCVG  180
EGRGGSGTGM GSFWSDEDRQ VAVAVLGHQA FDYLNALHTS LSDGHLTAVG GGDADLQTKL  240
QDLVEGTSSS CSSVSAWAYA IFWQISRSGS GDFVLGWGDG HCRELSDGEE EGRIRRYPLD  300
DANQKMRKRV LEKLHTLSGG SADENYALRL DRITDAEMYF LASMYFSFPK GEDAPGKALA  360
SRKHIWISEA GLNSPACSSY CVRTFLARSA GFRTILFVPF DTGVLELGSV DPVPESFEAL  420
HTIRSVFGQG RNKAAAAAAA GEKIGENHGT VSASRFGVGG HVAEYPKIFG MDLSLGHAQL  480
NERARALIVK PEQRPSELIT KHGDHHQNIP PTNGATVLQW NQSCIANSHQ PELGNGAPPH  540
ARHINGVVGQ DLLRTNQSQP QKPPPPAPQP RRLQPMSSHP LPQSGQIDFS TGEANSASVG  600
VSVGRLGAVD TELSDVEPPC KEDKPGTMEE RKPRKRGRKP ANGREEPLNH VEAERQRREK  660
LNQRFYALRS VVPNISKMDK ASLLGDAISY ITELQNKLKE MEAERETWGD PSFVDRKRRA  720
YMHPEIDVEA AQDEVIVRVS CPLDVHPVSK VIQALKDLQI DVVNSKVAAN SDSVLHTFVL  780
KAPGAEQPTK EKLIAALTQE LNAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	631	639	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	2e-70	bHLH family protein