PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV93405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | bHLH | ||||||||
Protein Properties | Length: 154aa MW: 17064.8 Da PI: 6.5296 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.4 | 5.2e-08 | 123 | 145 | 7 | 29 |
HHHHHHHHHHHHHHHHHHCTSCC CS HLH 7 erErrRRdriNsafeeLrellPk 29 +Er+RR+ri+++++ Lr+++Pk RWV93405.1 123 VAERKRRQRIRDRLHALRSMVPK 145 68********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MANNNGGDPD MAIAHDLQPW FPPQAMAASP PTSPWNPFRG PTEGDASTDE AVVAYLNSLL 60 TTADAEPSSQ PSAEHDDKEE EPPPKREARR QRRPGLAASG GSSEDDDEEQ RPGKRRHQSK 120 NLVAERKRRQ RIRDRLHALR SMVPKITKVE STLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 129 | KRRHQSKNLVAERKRR |
2 | 125 | 130 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16910.1 | 4e-10 | bHLH family protein |