PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV93330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | E2F/DP | ||||||||
Protein Properties | Length: 165aa MW: 19053.9 Da PI: 9.4419 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 52.4 | 8.9e-17 | 114 | 165 | 37 | 70 |
E2F_TDP 37 e..................dvknkrRRiYDilNVLealnliekkekneirwk 70 e dv+ ++RRiYDi+NVLe+++liekk kn+irwk RWV93330.1 114 EwttspgcavgftslmkisDVQVQKRRIYDITNVLEGIGLIEKKLKNRIRWK 165 34444566677777777778888****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MSGGQAAGNR SAQQLGQIFQ PPKQYLQFPS SRPPFVSPDE YHRFDGRRGG RDDMADALVI 60 KTPVSFWWRF VGLFFLSDEL DNLTDRVLRM CYLFVYLLKQ KSVQEDNEVV EISEWTTSPG 120 CAVGFTSLMK ISDVQVQKRR IYDITNVLEG IGLIEKKLKN RIRWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 4e-16 | E2F/DP family protein |